DIMA
TUM MIPS GSF
DIMA -- domain interaction map

Preferences
Calculation Measures
Similarity Threshold: CMM Threshold:
DPEA Threshold: DPEA-String Threshold:
original score
compressed score  (0..1)
Genomes to be queried
Archaea
Aeropyrum_pernix_K1
Archaeoglobus_fulgidus_DSM_4304
Caldivirga_maquilingensis_IC-167
Candidatus_Methanoregula_boonei_6A8
Candidatus_Methanosphaerula_palustris_E1-9c
Cenarchaeum_symbiosum_A
Desulfurococcus_kamchatkensis_1221n
Haloarcula_marismortui_ATCC_43049
Halobacterium_salinarum_R1
Halobacterium_sp._NRC-1
Haloquadratum_walsbyi_DSM_16790
Halorubrum_lacusprofundi_ATCC_49239
Hyperthermus_butylicus_DSM_5456
Ignicoccus_hospitalis_KIN4/I
korarchaeote_OPF1-KOR
Metallosphaera_sedula_DSM_5348
Methanobrevibacter_smithii_ATCC_35061
Methanocaldococcus_jannaschii_DSM_2661
Methanococcoides_burtonii_DSM_6242
Methanococcus_aeolicus_Nankai-3
Methanococcus_maripaludis_C5
Methanococcus_maripaludis_C6
Methanococcus_maripaludis_C7
Methanococcus_maripaludis_S2
Methanococcus_vannielii_SB
Methanocorpusculum_labreanum_Z
Methanoculleus_marisnigri_JR1
Methanopyrus_kandleri_AV19
Methanosaeta_thermophila_PT
Methanosarcina_acetivorans_C2A
Methanosarcina_barkeri_str._Fusaro
Methanosarcina_mazei_Go1
Methanosphaera_stadtmanae_DSM_3091
Methanospirillum_hungatei_JF-1
Methanothermobacter_thermautotrophicus_str._Delta_H
Nanoarchaeum_equitans_Kin4-M
Natronomonas_pharaonis_DSM_2160
Nitrosopumilus_maritimus_SCM1
Picrophilus_torridus_DSM_9790
Pyrobaculum_aerophilum_str._IM2
Pyrobaculum_arsenaticum_DSM_13514
Pyrobaculum_calidifontis_JCM_11548
Pyrobaculum_islandicum_DSM_4184
Pyrococcus_abyssi_GE5
Pyrococcus_furiosus_DSM_3638
Pyrococcus_horikoshii_OT3
Staphylothermus_marinus_F1
Sulfolobus_acidocaldarius_DSM_639
Sulfolobus_solfataricus_P2
Sulfolobus_tokodaii_str._7
Thermococcus_kodakarensis_KOD1
Thermococcus_onnurineus_NA1
Thermofilum_pendens_Hrk_5
Thermoplasma_acidophilum_DSM_1728
Thermoplasma_volcanium_GSS1
Thermoproteus_neutrophilus_V24Sta
uncultured_methanogenic_archaeon_RC-I
Eukaryota
Aedes_aegypti
Ajellomyces_capsulatus_NAm1
Anopheles_gambiae
Anopheles_gambiae_str._PEST
Apis_mellifera
Arabidopsis_thaliana
Ashbya_gossypii_ATCC_10895
Aspergillus_clavatus_NRRL_1
Aspergillus_flavus_NRRL3357
Aspergillus_fumigatus_Af293
Aspergillus_nidulans_FGSC_A4
Aspergillus_niger_ATCC_1015
Aspergillus_niger_CBS_513.88
Aspergillus_oryzae
Aspergillus_terreus_NIH2624
Batrachochytrium_dendrobatidis_JEL423
Beta_vulgaris_subsp._vulgaris
Bos_taurus
Botryotinia_fuckeliana_B05.10
Caenorhabditis_briggsae_AF16
Caenorhabditis_elegans
Candida_albicans_SC5314
Candida_dubliniensis_CD36
Candida_glabrata_CBS_138
Candida_tropicalis_MYA-3404
Canis_lupus_familiaris
Cavia_porcellus
Chaetomium_globosum_CBS_148.51
Chlamydomonas_reinhardtii
Ciona_intestinalis
Ciona_savignyi
Clavispora_lusitaniae_ATCC_42720
Coccidioides_immitis_RS
Cochliobolus_heterostrophus
Coprinopsis_cinerea_okayama7
Cryptococcus_neoformans_var._grubii_H99
Cryptococcus_neoformans_var._neoformans_B-3501A
Cryptococcus_neoformans_var._neoformans_JEC21
Cryptosporidium_parvum_Iowa_II
Cyanidium_caldarium
Danio_rerio
Dasypus_novemcinctus
Debaryomyces_hansenii_CBS767
Dictyostelium_discoideum_AX4
Dipodomys_ordii
Drosophila_melanogaster
Drosophila_simulans
Drosophila_yakuba
Echinops_telfairi
Encephalitozoon_cuniculi_GB-M1
Equus_caballus
Erinaceus_europaeus
Euglena_gracilis
Felis_catus
Fusarium_oxysporum_f._sp._lycopersici_4286
Gallus_gallus
Gasterosteus_aculeatus
Giardia_lamblia_ATCC_50803
Gibberella_moniliformis_7600
Gibberella_zeae_PH-1
Guillardia_theta
Homo_sapiens
Kluyveromyces_lactis_NRRL_Y-1140
Kluyveromyces_waltii_NCYC_2644
Laccaria_bicolor
Lama_pacos
Leishmania_braziliensis_MHOM/BR/75/M2904
Leishmania_infantum_JPCM5
Leishmania_major_strain_Friedlin
Lodderomyces_elongisporus_NRRL_YB-4239
Loxodonta_africana
Macaca_mulatta
Magnaporthe_grisea_70-15
Malassezia_globosa_CBS_7966
Microcebus_murinus
Monodelphis_domestica
Mus_musculus
Mycosphaerella_fijiensis_CIRAD86
Mycosphaerella_graminicola
Myotis_lucifugus
Nectria_haematococca_mpVI
Neosartorya_fischeri_NRRL_181
Neurospora_crassa_OR74A
Ochotona_princeps
Ornithorhynchus_anatinus
Oryctolagus_cuniculus
Oryza_sativa_Japonica_Group
Oryzias_latipes
Ostreococcus_lucimarinus_CCE9901
Otolemur_garnettii
Pan_troglodytes
Paramecium_tetraurelia_strain_d4-2
Phaeosphaeria_nodorum_SN15
Phanerochaete_chrysosporium_RP-78
Phycomyces_blakesleeanus
Phytophthora_ramorum
Phytophthora_sojae
Pichia_guilliermondii_ATCC_6260
Pichia_stipitis_CBS_6054
Plasmodium_falciparum_3D7
Podospora_anserina_DSM_980
Pongo_pygmaeus
Populus_trichocarpa
Postia_placenta
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3
Pyrenophora_tritici-repentis_Pt-1C-BFP
Rattus_norvegicus
Rhizopus_oryzae_RA_99-880
Saccharomyces_bayanus
Saccharomyces_castellii_NRRL_Y-12630
Saccharomyces_cerevisiae_S288c
Saccharomyces_kluyveri_NRRL_Y-12651
Saccharomyces_kudriavzevii_IFO_1802
Saccharomyces_mikatae_IFO_1815
Saccharomyces_paradoxus_NRRL_Y-17217
Schizosaccharomyces_japonicus
Schizosaccharomyces_pombe_972h-
Sclerotinia_sclerotiorum_1980
Sorex_araneus
Spermophilus_tridecemlineatus
Sporobolomyces_roseus_IAM_13481
Takifugu_rubripes
Tetrahymena_thermophila_SB210
Tetraodon_nigroviridis
Tribolium_castaneum
Trichoderma_reesei_QM6a
Trichoderma_virens_Gv29-8
Trypanosoma_brucei_TREU927
Tupaia_belangeri
Uncinocarpus_reesii_1704
Ustilago_maydis_521
Vitis_vinifera
Xenopus_tropicalis
Yarrowia_lipolytica_CLIB122
Bacteria
Acaryochloris_marina_MBIC11017
Acholeplasma_laidlawii_PG-8A
Acidiphilium_cryptum_JF-5
Acidithiobacillus_ferrooxidans_ATCC_23270
Acidithiobacillus_ferrooxidans_ATCC_53993
Acidobacteria_bacterium_Ellin345
Acidothermus_cellulolyticus_11B
Acidovorax_avenae_subsp._citrulli_AAC00-1
Acidovorax_sp._JS42
Acinetobacter_baumannii_AB0057
Acinetobacter_baumannii_AB307-0294
Acinetobacter_baumannii_ACICU
Acinetobacter_baumannii_ATCC_17978
Acinetobacter_baumannii_AYE
Acinetobacter_baumannii_SDF
Acinetobacter_sp._ADP1
Actinobacillus_pleuropneumoniae_L20
Actinobacillus_pleuropneumoniae_serovar_3_str._JL03
Actinobacillus_pleuropneumoniae_serovar_7_str._AP76
Actinobacillus_succinogenes_130Z
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966
Aeromonas_salmonicida_subsp._salmonicida_A449
Agrobacterium_radiobacter_K84
Agrobacterium_tumefaciens_str._C58
Agrobacterium_vitis_S4
Akkermansia_muciniphila_ATCC_BAA-835
Alcanivorax_borkumensis_SK2
Alkalilimnicola_ehrlichei_MLHE-1
Alkaliphilus_metalliredigens_QYMF
Alkaliphilus_oremlandii_OhILAs
Alteromonas_macleodii_Deep_ecotype
Anabaena_variabilis_ATCC_29413
Anaerocellum_thermophilum_DSM_6725
Anaeromyxobacter_dehalogenans_2CP-1
Anaeromyxobacter_dehalogenans_2CP-C
Anaeromyxobacter_sp._Fw109-5
Anaeromyxobacter_sp._K
Anaplasma_marginale_str._Florida
Anaplasma_marginale_str._St._Maries
Anaplasma_phagocytophilum_HZ
Anoxybacillus_flavithermus_WK1
Aquifex_aeolicus_VF5
Arcobacter_butzleri_RM4018
Arthrobacter_aurescens_TC1
Arthrobacter_chlorophenolicus_A6
Arthrobacter_sp._FB24
Aster_yellows_witches-broom_phytoplasma_AYWB
Azoarcus_sp._BH72
Azoarcus_sp._EbN1
Azorhizobium_caulinodans_ORS_571
Bacillus_amyloliquefaciens_FZB42
Bacillus_anthracis_str._Ames_Ancestor
Bacillus_anthracis_str._Ames
Bacillus_anthracis_str._Sterne
Bacillus_cereus_AH187
Bacillus_cereus_AH820
Bacillus_cereus_ATCC_10987
Bacillus_cereus_ATCC_14579
Bacillus_cereus_B4264
Bacillus_cereus_E33L
Bacillus_cereus_G9842
Bacillus_cereus_Q1
Bacillus_cereus_subsp._cytotoxis_NVH_391-98
Bacillus_clausii_KSM-K16
Bacillus_halodurans_C-125
Bacillus_licheniformis_ATCC_14580
Bacillus_pumilus_SAFR-032
Bacillus_subtilis_subsp._subtilis_str._168
Bacillus_thuringiensis_serovar_konkukian_str._97-27
Bacillus_thuringiensis_str._Al_Hakam
Bacillus_weihenstephanensis_KBAB4
Bacteroides_fragilis_NCTC_9343
Bacteroides_fragilis_YCH46
Bacteroides_thetaiotaomicron_VPI-5482
Bacteroides_vulgatus_ATCC_8482
Bartonella_bacilliformis_KC583
Bartonella_henselae_str._Houston-1
Bartonella_quintana_str._Toulouse
Bartonella_tribocorum_CIP_105476
Baumannia_cicadellinicola_str._Hc_(Homalodisca_coagulata)
Bdellovibrio_bacteriovorus_HD100
Beijerinckia_indica_subsp._indica_ATCC_9039
Bifidobacterium_adolescentis_ATCC_15703
Bifidobacterium_animalis_subsp._lactis_AD011
Bifidobacterium_longum_bv._Infantis_str._ATCC_15697
Bifidobacterium_longum_DJO10A
Bifidobacterium_longum_NCC2705
Bordetella_avium_197N
Bordetella_bronchiseptica_RB50
Bordetella_parapertussis_12822
Bordetella_pertussis_Tohama_I
Bordetella_petrii_DSM_12804
Borrelia_afzelii_PKo
Borrelia_burgdorferi_B31
Borrelia_burgdorferi_ZS7
Borrelia_duttonii_Ly
Borrelia_garinii_PBi
Borrelia_hermsii_DAH
Borrelia_recurrentis_A1
Borrelia_turicatae_91E135
Brachyspira_hyodysenteriae_WA1
Bradyrhizobium_japonicum_USDA_110
Bradyrhizobium_sp._BTAi1
Bradyrhizobium_sp._ORS278
Brucella_abortus_biovar_1_str._9-941
Brucella_abortus_S19
Brucella_canis_ATCC_23365
Brucella_melitensis_16M
Brucella_melitensis_ATCC_23457
Brucella_melitensis_biovar_Abortus_2308
Brucella_ovis_ATCC_25840
Brucella_suis_1330
Brucella_suis_ATCC_23445
Buchnera_aphidicola_str._5A_(Acyrthosiphon_pisum)
Buchnera_aphidicola_str._APS_(Acyrthosiphon_pisum)
Buchnera_aphidicola_str._Bp_(Baizongia_pistaciae)
Buchnera_aphidicola_str._Cc_(Cinara_cedri)
Buchnera_aphidicola_str._Sg_(Schizaphis_graminum)
Buchnera_aphidicola_str._Tuc7_(Acyrthosiphon_pisum)
Burkholderia_ambifaria_AMMD
Burkholderia_ambifaria_MC40-6
Burkholderia_cenocepacia_AU_1054
Burkholderia_cenocepacia_HI2424
Burkholderia_cenocepacia_J2315
Burkholderia_cenocepacia_MC0-3
Burkholderia_mallei_ATCC_23344
Burkholderia_mallei_NCTC_10229
Burkholderia_mallei_NCTC_10247
Burkholderia_mallei_SAVP1
Burkholderia_multivorans_ATCC_17616
Burkholderia_phymatum_STM815
Burkholderia_phytofirmans_PsJN
Burkholderia_pseudomallei_1106a
Burkholderia_pseudomallei_1710b
Burkholderia_pseudomallei_668
Burkholderia_pseudomallei_K96243
Burkholderia_sp._383
Burkholderia_thailandensis_E264
Burkholderia_vietnamiensis_G4
Burkholderia_xenovorans_LB400
Caldicellulosiruptor_saccharolyticus_DSM_8903
Campylobacter_concisus_13826
Campylobacter_curvus_525.92
Campylobacter_fetus_subsp._fetus_82-40
Campylobacter_hominis_ATCC_BAA-381
Campylobacter_jejuni_RM1221
Campylobacter_jejuni_subsp._doylei_269.97
Campylobacter_jejuni_subsp._jejuni_81116
Campylobacter_jejuni_subsp._jejuni_81-176
Campylobacter_jejuni_subsp._jejuni_NCTC_11168
Campylobacter_lari_RM2100
Candidatus_Azobacteroides_pseudotrichonymphae_genomovar._CFP2
Candidatus_Blochmannia_floridanus
Candidatus_Blochmannia_pennsylvanicus_str._BPEN
Candidatus_Carsonella_ruddii_PV
Candidatus_Desulforudis_audaxviator_MP104C
Candidatus_Kuenenia_stuttgartiensis
Candidatus_Pelagibacter_ubique_HTCC1062
Candidatus_Phytoplasma_australiense
Candidatus_Phytoplasma_mali
Candidatus_Protochlamydia_amoebophila_UWE25
Candidatus_Ruthia_magnifica_str._Cm_(Calyptogena_magnifica)
Candidatus_Sulcia_muelleri_GWSS
Candidatus_Vesicomyosocius_okutanii_HA
Carboxydothermus_hydrogenoformans_Z-2901
Caulobacter_crescentus_CB15
Caulobacter_crescentus_NA1000
Caulobacter_sp._K31
Cellvibrio_japonicus_Ueda107
Chlamydia_muridarum_Nigg
Chlamydia_trachomatis_434/Bu
Chlamydia_trachomatis_A/HAR-13
Chlamydia_trachomatis_D/UW-3/CX
Chlamydia_trachomatis_L2b/UCH-1/proctitis
Chlamydophila_abortus_S26/3
Chlamydophila_caviae_GPIC
Chlamydophila_felis_Fe/C-56
Chlamydophila_pneumoniae_AR39
Chlamydophila_pneumoniae_CWL029
Chlamydophila_pneumoniae_J138
Chlamydophila_pneumoniae_TW-183
Chlorobaculum_parvum_NCIB_8327
Chlorobium_chlorochromatii_CaD3
Chlorobium_limicola_DSM_245
Chlorobium_phaeobacteroides_BS1
Chlorobium_phaeobacteroides_DSM_266
Chlorobium_tepidum_TLS
Chloroflexus_aggregans_DSM_9485
Chloroflexus_aurantiacus_J-10-fl
Chloroflexus_sp._Y-400-fl
Chloroherpeton_thalassium_ATCC_35110
Chromobacterium_violaceum_ATCC_12472
Chromohalobacter_salexigens_DSM_3043
Citrobacter_koseri_ATCC_BAA-895
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382
Clavibacter_michiganensis_subsp._sepedonicus
Clostridium_acetobutylicum_ATCC_824
Clostridium_beijerinckii_NCIMB_8052
Clostridium_botulinum_A3_str._Loch_Maree
Clostridium_botulinum_A_str._ATCC_19397
Clostridium_botulinum_A_str._ATCC_3502
Clostridium_botulinum_A_str._Hall
Clostridium_botulinum_B1_str._Okra
Clostridium_botulinum_B_str._Eklund_17B
Clostridium_botulinum_E3_str._Alaska_E43
Clostridium_botulinum_F_str._Langeland
Clostridium_cellulolyticum_H10
Clostridium_difficile_630
Clostridium_kluyveri_DSM_555
Clostridium_kluyveri_NBRC_12016
Clostridium_novyi_NT
Clostridium_perfringens_ATCC_13124
Clostridium_perfringens_SM101
Clostridium_perfringens_str._13
Clostridium_phytofermentans_ISDg
Clostridium_tetani_E88
Clostridium_thermocellum_ATCC_27405
Colwellia_psychrerythraea_34H
Coprothermobacter_proteolyticus_DSM_5265
Corynebacterium_diphtheriae_NCTC_13129
Corynebacterium_efficiens_YS-314
Corynebacterium_glutamicum_ATCC_13032
Corynebacterium_glutamicum_R
Corynebacterium_jeikeium_K411
Corynebacterium_urealyticum_DSM_7109
Coxiella_burnetii_CbuG_Q212
Coxiella_burnetii_CbuK_Q154
Coxiella_burnetii_Dugway_5J108-111
Coxiella_burnetii_MSU_Goat_Q177
Coxiella_burnetii_RSA_331
Coxiella_burnetii_RSA_334
Coxiella_burnetii_RSA_493
Cupriavidus_taiwanensis
Cyanothece_sp._ATCC_51142
Cyanothece_sp._PCC_7424
Cyanothece_sp._PCC_7425
Cyanothece_sp._PCC_8801
Cytophaga_hutchinsonii_ATCC_33406
Dechloromonas_aromatica_RCB
Dehalococcoides_ethenogenes_195
Dehalococcoides_sp._BAV1
Dehalococcoides_sp._CBDB1
Deinococcus_geothermalis_DSM_11300
Deinococcus_radiodurans_R1
Delftia_acidovorans_SPH-1
Desulfatibacillum_alkenivorans_AK-01
Desulfitobacterium_hafniense_DCB-2
Desulfitobacterium_hafniense_Y51
Desulfobacterium_autotrophicum_HRM2
Desulfococcus_oleovorans_Hxd3
Desulfotalea_psychrophila_LSv54
Desulfotomaculum_reducens_MI-1
Desulfovibrio_desulfuricans_subsp._desulfuricans_str._ATCC_27774
Desulfovibrio_desulfuricans_subsp._desulfuricans_str._G20
Desulfovibrio_vulgaris_str._Miyazaki_F
Desulfovibrio_vulgaris_subsp._vulgaris_DP4
Desulfovibrio_vulgaris_subsp._vulgaris_str._Hildenborough
Diaphorobacter_sp._TPSY
Dichelobacter_nodosus_VCS1703A
Dictyoglomus_thermophilum_H-6-12
Dictyoglomus_turgidum_DSM_6724
Dinoroseobacter_shibae_DFL_12
Ehrlichia_canis_str._Jake
Ehrlichia_chaffeensis_str._Arkansas
Ehrlichia_ruminantium_str._Gardel
Ehrlichia_ruminantium_str._Welgevonden
Elusimicrobium_minutum_Pei191
Enterobacter_sakazakii_ATCC_BAA-894
Enterobacter_sp._638
Enterococcus_faecalis_V583
Erwinia_carotovora_subsp._atroseptica_SCRI1043
Erwinia_tasmaniensis_Et1/99
Erythrobacter_litoralis_HTCC2594
Escherichia_coli_0127:H6_E2348/69
Escherichia_coli_536
Escherichia_coli_55989
Escherichia_coli_APEC_O1
Escherichia_coli_ATCC_8739
Escherichia_coli_CFT073
Escherichia_coli_E24377A
Escherichia_coli_ED1a
Escherichia_coli_HS
Escherichia_coli_IAI1
Escherichia_coli_IAI39
Escherichia_coli_K12
Escherichia_coli_LF82
Escherichia_coli_O157:H7_EDL933
Escherichia_coli_O157:H7_str._EC4115
Escherichia_coli_O157:H7_str._Sakai
Escherichia_coli_S88
Escherichia_coli_SE11
Escherichia_coli_SMS-3-5
Escherichia_coli_str._K12_substr._DH10B
Escherichia_coli_UMN026
Escherichia_coli_UTI89
Escherichia_coli_W3110
Escherichia_fergusonii_ATCC_35469
Exiguobacterium_sibiricum_255-15
Fervidobacterium_nodosum_Rt17-B1
Finegoldia_magna_ATCC_29328
Flavobacterium_johnsoniae_UW101
Flavobacterium_psychrophilum_JIP02/86
Francisella_philomiragia_subsp._philomiragia_ATCC_25017
Francisella_tularensis_subsp._holarctica
Francisella_tularensis_subsp._holarctica_FTA
Francisella_tularensis_subsp._holarctica_OSU18
Francisella_tularensis_subsp._mediasiatica_FSC147
Francisella_tularensis_subsp._novicida_U112
Francisella_tularensis_subsp._tularensis_FSC198
Francisella_tularensis_subsp._tularensis_SCHU_S4
Francisella_tularensis_subsp._tularensis_WY96-3418
Frankia_alni_ACN14a
Frankia_sp._CcI3
Frankia_sp._EAN1pec
Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586
Geobacillus_kaustophilus_HTA426
Geobacillus_thermodenitrificans_NG80-2
Geobacter_bemidjiensis_Bem
Geobacter_lovleyi_SZ
Geobacter_metallireducens_GS-15
Geobacter_sp._FRC-32
Geobacter_sulfurreducens_PCA
Geobacter_uraniumreducens_Rf4
Gloeobacter_violaceus_PCC_7421
Gluconacetobacter_diazotrophicus_PAl_5
Gluconobacter_oxydans_621H
Gramella_forsetii_KT0803
Granulibacter_bethesdensis_CGDNIH1
Haemophilus_ducreyi_35000HP
Haemophilus_influenzae_86-028NP
Haemophilus_influenzae_PittEE
Haemophilus_influenzae_PittGG
Haemophilus_influenzae_Rd_KW20
Haemophilus_parasuis_SH0165
Haemophilus_somnus_129PT
Haemophilus_somnus_2336
Hahella_chejuensis_KCTC_2396
Halorhodospira_halophila_SL1
Halothermothrix_orenii_H_168
Helicobacter_acinonychis_str._Sheeba
Helicobacter_hepaticus_ATCC_51449
Helicobacter_pylori_26695
Helicobacter_pylori_G27
Helicobacter_pylori_HPAG1
Helicobacter_pylori_J99
Helicobacter_pylori_P12
Helicobacter_pylori_Shi470
Heliobacterium_modesticaldum_Ice1
Herminiimonas_arsenicoxydans
Herpetosiphon_aurantiacus_ATCC_23779
Hydrogenobaculum_sp._Y04AAS1
Hyphomonas_neptunium_ATCC_15444
Idiomarina_loihiensis_L2TR
Jannaschia_sp._CCS1
Janthinobacterium_sp._Marseille
Kineococcus_radiotolerans_SRS30216
Klebsiella_pneumoniae_342
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578
Kocuria_rhizophila_DC2201
Lactobacillus_acidophilus_NCFM
Lactobacillus_brevis_ATCC_367
Lactobacillus_casei_ATCC_334
Lactobacillus_casei
Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_11842
Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_BAA-365
Lactobacillus_fermentum_IFO_3956
Lactobacillus_gasseri_ATCC_33323
Lactobacillus_helveticus_DPC_4571
Lactobacillus_johnsonii_NCC_533
Lactobacillus_plantarum_WCFS1
Lactobacillus_reuteri_F275
Lactobacillus_sakei_subsp._sakei_23K
Lactobacillus_salivarius_subsp._salivarius_UCC118
Lactococcus_lactis_subsp._cremoris_MG1363
Lactococcus_lactis_subsp._cremoris_SK11
Lactococcus_lactis_subsp._lactis_Il1403
Lawsonia_intracellularis_PHE/MN1-00
Legionella_pneumophila_str._Corby
Legionella_pneumophila_str._Lens
Legionella_pneumophila_str._Paris
Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1
Leifsonia_xyli_subsp._xyli_str._CTCB07
Leptospira_biflexa_serovar_Patoc_strain_Patoc_1_(Ames)
Leptospira_biflexa_serovar_Patoc_strain_Patoc_1_(Paris)
Leptospira_borgpetersenii_serovar_Hardjo-bovis_JB197
Leptospira_borgpetersenii_serovar_Hardjo-bovis_L550
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130
Leptospira_interrogans_serovar_Lai_str._56601
Leptothrix_cholodnii_SP-6
Leuconostoc_citreum_KM20
Leuconostoc_mesenteroides_subsp._mesenteroides_ATCC_8293
Listeria_innocua_Clip11262
Listeria_monocytogenes_EGD-e
Listeria_monocytogenes_HCC23
Listeria_monocytogenes_str._4b_F2365
Listeria_welshimeri_serovar_6b_str._SLCC5334
Lysinibacillus_sphaericus_C3-41
Macrococcus_caseolyticus_JCSC5402
Magnetococcus_sp._MC-1
Magnetospirillum_magneticum_AMB-1
Mannheimia_succiniciproducens_MBEL55E
Maricaulis_maris_MCS10
Marinobacter_aquaeolei_VT8
Marinomonas_sp._MWYL1
Mesoplasma_florum_L1
Mesorhizobium_loti_MAFF303099
Mesorhizobium_sp._BNC1
Methylibium_petroleiphilum_PM1
Methylobacillus_flagellatus_KT
Methylobacterium_chloromethanicum_CM4
Methylobacterium_extorquens_PA1
Methylobacterium_nodulans_ORS_2060
Methylobacterium_populi_BJ001
Methylobacterium_radiotolerans_JCM_2831
Methylobacterium_sp._4-46
Methylocella_silvestris_BL2
Methylococcus_capsulatus_str._Bath
Methylokorus_infernorum_V4
Microcystis_aeruginosa_NIES-843
Moorella_thermoacetica_ATCC_39073
Mycobacterium_abscessus
Mycobacterium_avium_104
Mycobacterium_avium_subsp._paratuberculosis_K-10
Mycobacterium_bovis_AF2122/97
Mycobacterium_bovis_BCG_str._Pasteur_1173P2
Mycobacterium_bovis_BCG_str._Tokyo_172
Mycobacterium_gilvum_PYR-GCK
Mycobacterium_leprae_Br4923
Mycobacterium_leprae_TN
Mycobacterium_marinum_M
Mycobacterium_smegmatis_str._MC2_155
Mycobacterium_sp._JLS
Mycobacterium_sp._KMS
Mycobacterium_sp._MCS
Mycobacterium_tuberculosis_CDC1551
Mycobacterium_tuberculosis_F11
Mycobacterium_tuberculosis_H37Ra
Mycobacterium_tuberculosis_H37Rv
Mycobacterium_ulcerans_Agy99
Mycobacterium_vanbaalenii_PYR-1
Mycoplasma_agalactiae_PG2
Mycoplasma_arthritidis_158L3-1
Mycoplasma_capricolum_subsp._capricolum_ATCC_27343
Mycoplasma_gallisepticum_R
Mycoplasma_genitalium_G37
Mycoplasma_hyopneumoniae_232
Mycoplasma_hyopneumoniae_7448
Mycoplasma_hyopneumoniae_J
Mycoplasma_mobile_163K
Mycoplasma_mycoides_subsp._mycoides_SC_str._PG1
Mycoplasma_penetrans_HF-2
Mycoplasma_pneumoniae_M129
Mycoplasma_pulmonis_UAB_CTIP
Mycoplasma_synoviae_53
Myxococcus_xanthus_DK_1622
Natranaerobius_thermophilus_JW/NM-WN-LF
Nautilia_profundicola_AmH
Neisseria_gonorrhoeae_FA_1090
Neisseria_gonorrhoeae_NCCP11945
Neisseria_meningitidis_053442
Neisseria_meningitidis_FAM18
Neisseria_meningitidis_MC58
Neisseria_meningitidis_Z2491
Neorickettsia_sennetsu_str._Miyayama
Nitratiruptor_sp._SB155-2
Nitrobacter_hamburgensis_X14
Nitrobacter_winogradskyi_Nb-255
Nitrosococcus_oceani_ATCC_19707
Nitrosomonas_europaea_ATCC_19718
Nitrosomonas_eutropha_C91
Nitrosospira_multiformis_ATCC_25196
Nocardia_farcinica_IFM_10152
Nocardioides_sp._JS614
Nostoc_punctiforme_PCC_73102
Nostoc_sp._PCC_7120
Novosphingobium_aromaticivorans_DSM_12444
Oceanobacillus_iheyensis_HTE831
Ochrobactrum_anthropi_ATCC_49188
Oenococcus_oeni_PSU-1
Oligotropha_carboxidovorans_OM5
Onion_yellows_phytoplasma_OY-M
Opitutus_terrae_PB90-1
Orientia_tsutsugamushi_str._Boryong
Orientia_tsutsugamushi_str._Ikeda
Parabacteroides_distasonis_ATCC_8503
Paracoccus_denitrificans_PD1222
Parvibaculum_lavamentivorans_DS-1
Pasteurella_multocida_subsp._multocida_str._Pm70
Pediococcus_pentosaceus_ATCC_25745
Pelobacter_carbinolicus_DSM_2380
Pelobacter_propionicus_DSM_2379
Pelodictyon_luteolum_DSM_273
Pelodictyon_phaeoclathratiforme_BU-1
Pelotomaculum_thermopropionicum_SI
Persephonella_marina_EX-H1
Petrotoga_mobilis_SJ95
Phenylobacterium_zucineum_HLK1
Photobacterium_profundum_SS9
Photorhabdus_luminescens_subsp._laumondii_TTO1
Polaromonas_naphthalenivorans_CJ2
Polaromonas_sp._JS666
Polynucleobacter_necessarius_STIR1
Polynucleobacter_sp._QLW-P1DMWA-1
Porphyromonas_gingivalis_ATCC_33277
Porphyromonas_gingivalis_W83
Prevotella_intermedia_17
Prochlorococcus_marinus_str._AS9601
Prochlorococcus_marinus_str._MIT_9211
Prochlorococcus_marinus_str._MIT_9215
Prochlorococcus_marinus_str._MIT_9301
Prochlorococcus_marinus_str._MIT_9303
Prochlorococcus_marinus_str._MIT_9312
Prochlorococcus_marinus_str._MIT_9313
Prochlorococcus_marinus_str._MIT_9515
Prochlorococcus_marinus_str._NATL1A
Prochlorococcus_marinus_str._NATL2A
Prochlorococcus_marinus_subsp._marinus_str._CCMP1375
Prochlorococcus_marinus_subsp._pastoris_str._CCMP1986
Propionibacterium_acnes_KPA171202
Prosthecochloris_aestuarii_DSM_271
Prosthecochloris_vibrioformis_DSM_265
Proteus_mirabilis_HI4320
Pseudoalteromonas_atlantica_T6c
Pseudoalteromonas_haloplanktis_TAC125
Pseudomonas_aeruginosa_LESB58
Pseudomonas_aeruginosa_PA7
Pseudomonas_aeruginosa_PAO1
Pseudomonas_aeruginosa_UCBPP-PA14
Pseudomonas_entomophila_L48
Pseudomonas_fluorescens_Pf-5
Pseudomonas_fluorescens_PfO-1
Pseudomonas_mendocina_ymp
Pseudomonas_putida_F1
Pseudomonas_putida_GB-1
Pseudomonas_putida_KT2440
Pseudomonas_putida_W619
Pseudomonas_stutzeri_A1501
Pseudomonas_syringae_pv._phaseolicola_1448A
Pseudomonas_syringae_pv._syringae_B728a
Pseudomonas_syringae_pv._tomato_str._DC3000
Psychrobacter_arcticus_273-4
Psychrobacter_cryohalolentis_K5
Psychrobacter_sp._PRwf-1
Psychromonas_ingrahamii_37
Ralstonia_eutropha_H16
Ralstonia_eutropha_JMP134
Ralstonia_metallidurans_CH34
Ralstonia_pickettii_12J
Ralstonia_solanacearum_GMI1000
Renibacterium_salmoninarum_ATCC_33209
Rhizobium_etli_CFN_42
Rhizobium_etli_CIAT_652
Rhizobium_leguminosarum_bv._trifolii_WSM2304
Rhizobium_leguminosarum_bv._viciae_3841
Rhodobacter_sphaeroides_2.4.1
Rhodobacter_sphaeroides_ATCC_17025
Rhodobacter_sphaeroides_ATCC_17029
Rhodobacter_sphaeroides_KD131
Rhodococcus_sp._RHA1
Rhodoferax_ferrireducens_T118
Rhodopirellula_baltica_SH_1
Rhodopseudomonas_palustris_BisA53
Rhodopseudomonas_palustris_BisB18
Rhodopseudomonas_palustris_BisB5
Rhodopseudomonas_palustris_CGA009
Rhodopseudomonas_palustris_HaA2
Rhodopseudomonas_palustris_TIE-1
Rhodospirillum_centenum_SW
Rhodospirillum_rubrum_ATCC_11170
Rickettsia_akari_str._Hartford
Rickettsia_bellii_OSU_85-389
Rickettsia_bellii_RML369-C
Rickettsia_canadensis_str._McKiel
Rickettsia_conorii_str._Malish_7
Rickettsia_felis_URRWXCal2
Rickettsia_massiliae_MTU5
Rickettsia_prowazekii_str._Madrid_E
Rickettsia_rickettsii_str._Iowa
Rickettsia_rickettsii_str._Sheila_Smith
Rickettsia_typhi_str._Wilmington
Roseiflexus_castenholzii_DSM_13941
Roseiflexus_sp._RS-1
Roseobacter_denitrificans_OCh_114
Rubrobacter_xylanophilus_DSM_9941
Saccharophagus_degradans_2-40
Saccharopolyspora_erythraea_NRRL_2338
Salinibacter_ruber_DSM_13855
Salinispora_arenicola_CNS-205
Salinispora_tropica_CNB-440
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67
Salmonella_enterica_subsp._enterica_serovar_Dublin_str._CT_02021853
Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109
Salmonella_enterica_subsp._enterica_serovar_Gallinarum_str._287/91
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._AKU_12601
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18
Salmonella_enterica_subsp._enterica_serovar_Typhi_Ty2
Salmonella_typhimurium_LT2
Serratia_proteamaculans_568
Shewanella_amazonensis_SB2B
Shewanella_baltica_OS155
Shewanella_baltica_OS185
Shewanella_baltica_OS195
Shewanella_baltica_OS223
Shewanella_denitrificans_OS217
Shewanella_frigidimarina_NCIMB_400
Shewanella_halifaxensis_HAW-EB4
Shewanella_loihica_PV-4
Shewanella_oneidensis_MR-1
Shewanella_pealeana_ATCC_700345
Shewanella_piezotolerans_WP3
Shewanella_putrefaciens_CN-32
Shewanella_sediminis_HAW-EB3
Shewanella_sp._ANA-3
Shewanella_sp._MR-4
Shewanella_sp._MR-7
Shewanella_sp._W3-18-1
Shewanella_woodyi_ATCC_51908
Shigella_boydii_CDC_3083-94
Shigella_boydii_Sb227
Shigella_dysenteriae_Sd197
Shigella_flexneri_2a_str._2457T
Shigella_flexneri_2a_str._301
Shigella_flexneri_5_str._8401
Shigella_sonnei_Ss046
Silicibacter_pomeroyi_DSS-3
Silicibacter_sp._TM1040
Sinorhizobium_medicae_WSM419
Sinorhizobium_meliloti_1021
Sodalis_glossinidius_str._morsitans
Solibacter_usitatus_Ellin6076
Sorangium_cellulosum_So_ce_56
Sphingomonas_wittichii_RW1
Sphingopyxis_alaskensis_RB2256
Staphylococcus_aureus_RF122
Staphylococcus_aureus_subsp._aureus_COL
Staphylococcus_aureus_subsp._aureus_JH1
Staphylococcus_aureus_subsp._aureus_JH9
Staphylococcus_aureus_subsp._aureus_MRSA252
Staphylococcus_aureus_subsp._aureus_MSSA476
Staphylococcus_aureus_subsp._aureus_Mu3
Staphylococcus_aureus_subsp._aureus_Mu50
Staphylococcus_aureus_subsp._aureus_MW2
Staphylococcus_aureus_subsp._aureus_N315
Staphylococcus_aureus_subsp._aureus_NCTC_8325
Staphylococcus_aureus_subsp._aureus_str._Newman
Staphylococcus_aureus_subsp._aureus_USA300
Staphylococcus_aureus_subsp._aureus_USA300_TCH1516
Staphylococcus_carnosus_subsp._carnosus_TM300
Staphylococcus_epidermidis_ATCC_12228
Staphylococcus_epidermidis_RP62A
Staphylococcus_haemolyticus_JCSC1435
Staphylococcus_saprophyticus_subsp._saprophyticus_ATCC_15305
Stenotrophomonas_maltophilia_K279a
Stenotrophomonas_maltophilia_R551-3
Streptococcus_agalactiae_2603V/R
Streptococcus_agalactiae_A909
Streptococcus_agalactiae_NEM316
Streptococcus_equi_subsp._zooepidemicus_MGCS10565
Streptococcus_gordonii_str._Challis_substr._CH1
Streptococcus_mutans_UA159
Streptococcus_pneumoniae_ATCC_700669
Streptococcus_pneumoniae_CGSP14
Streptococcus_pneumoniae_D39
Streptococcus_pneumoniae_G54
Streptococcus_pneumoniae_Hungary19A-6
Streptococcus_pneumoniae_R6
Streptococcus_pneumoniae_TIGR4
Streptococcus_pyogenes_M1_GAS
Streptococcus_pyogenes_MGAS10270
Streptococcus_pyogenes_MGAS10394
Streptococcus_pyogenes_MGAS10750
Streptococcus_pyogenes_MGAS2096
Streptococcus_pyogenes_MGAS315
Streptococcus_pyogenes_MGAS5005
Streptococcus_pyogenes_MGAS6180
Streptococcus_pyogenes_MGAS8232
Streptococcus_pyogenes_MGAS9429
Streptococcus_pyogenes_NZ131
Streptococcus_pyogenes_SSI-1
Streptococcus_pyogenes_str._Manfredo
Streptococcus_sanguinis_SK36
Streptococcus_suis_05ZYH33
Streptococcus_suis_98HAH33
Streptococcus_thermophilus_CNRZ1066
Streptococcus_thermophilus_LMD-9
Streptococcus_thermophilus_LMG_18311
Streptococcus_uberis_0140J
Streptomyces_avermitilis_MA-4680
Streptomyces_coelicolor_A3(2)
Streptomyces_griseus_subsp._griseus_NBRC_13350
Sulfurihydrogenibium_sp._YO3AOP1
Sulfurimonas_denitrificans_DSM_1251
Sulfurovum_sp._NBC37-1
Symbiobacterium_thermophilum_IAM_14863
Synechococcus_elongatus_PCC_6301
Synechococcus_elongatus_PCC_7942
Synechococcus_sp._CC9311
Synechococcus_sp._CC9605
Synechococcus_sp._CC9902
Synechococcus_sp._JA-2-3Ba(2-13)
Synechococcus_sp._JA-3-3Ab
Synechococcus_sp._PCC_7002
Synechococcus_sp._RCC307
Synechococcus_sp._WH_7803
Synechococcus_sp._WH_8102
Synechocystis_sp._PCC_6803
Syntrophobacter_fumaroxidans_MPOB
Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen
Syntrophus_aciditrophicus_SB
Tannerella_forsythensis_ATCC_43037
Thauera_sp._MZ1T
Thermoanaerobacter_ethanolicus_ATCC_33223
Thermoanaerobacter_ethanolicus_X514
Thermoanaerobacter_tengcongensis_MB4
Thermobifida_fusca_YX
Thermodesulfovibrio_yellowstonii_DSM_11347
Thermomicrobium_roseum_DSM_5159
Thermosipho_africanus_TCF52B
Thermosipho_melanesiensis_BI429
Thermosynechococcus_elongatus_BP-1
Thermotoga_lettingae_TMO
Thermotoga_maritima_MSB8
Thermotoga_neapolitana_DSM_4359
Thermotoga_petrophila_RKU-1
Thermotoga_sp._RQ2
Thermus_thermophilus_HB27
Thermus_thermophilus_HB8
Thioalkalivibrio_sp._HL-EbGR7
Thiobacillus_denitrificans_ATCC_25259
Thiomicrospira_crunogena_XCL-2
Treponema_denticola_ATCC_35405
Treponema_pallidum_subsp._pallidum_SS14
Treponema_pallidum_subsp._pallidum_str._Nichols
Trichodesmium_erythraeum_IMS101
Tropheryma_whipplei_str._Twist
Tropheryma_whipplei_TW08/27
uncultured_Termite_group_1_bacterium_phylotype_Rs-D17
Ureaplasma_parvum_serovar_3_str._ATCC_27815
Ureaplasma_parvum_serovar_3_str._ATCC_700970
Ureaplasma_urealyticum_serovar_10_str._ATCC_33699
Verminephrobacter_eiseniae_EF01-2
Vibrio_cholerae_O1_biovar_eltor_str._N16961
Vibrio_cholerae_O395
Vibrio_fischeri_ES114
Vibrio_fischeri_MJ11
Vibrio_harveyi_ATCC_BAA-1116
Vibrio_parahaemolyticus_RIMD_2210633
Vibrio_salmonicida_LFI1238
Vibrio_splendidus_LGP32
Vibrio_vulnificus_CMCP6
Vibrio_vulnificus_YJ016
Victivallis_vadensis_ATCC_BAA-548
Wigglesworthia_glossinidia_endosymbiont_of_Glossina_brevipalpis
Wolbachia_endosymbiont_of_Drosophila_melanogaster
Wolbachia_endosymbiont_strain_TRS_of_Brugia_malayi
Wolbachia_pipientis
Wolbachia_sp._wRi
Wolinella_succinogenes_DSM_1740
Xanthobacter_autotrophicus_Py2
Xanthomonas_axonopodis_pv._citri_str._306
Xanthomonas_campestris_pv._campestris
Xanthomonas_campestris_pv._campestris_str._8004
Xanthomonas_campestris_pv._campestris_str._ATCC_33913
Xanthomonas_campestris_pv._vesicatoria_str._85-10
Xanthomonas_oryzae_pv._oryzae_KACC10331
Xanthomonas_oryzae_pv._oryzae_MAFF_311018
Xanthomonas_oryzae_pv._oryzae_PXO99A
Xylella_fastidiosa_9a5c
Xylella_fastidiosa_M12
Xylella_fastidiosa_M23
Xylella_fastidiosa_Temecula1
Yersinia_enterocolitica_subsp._enterocolitica_8081
Yersinia_pestis_Angola
Yersinia_pestis_Antiqua
Yersinia_pestis_biovar_Microtus_str._91001
Yersinia_pestis_CO92
Yersinia_pestis_KIM
Yersinia_pestis_Nepal516
Yersinia_pestis_Pestoides_F
Yersinia_pseudotuberculosis_IP_31758
Yersinia_pseudotuberculosis_IP_32953
Yersinia_pseudotuberculosis_PB1/+
Yersinia_pseudotuberculosis_YPIII
Zymomonas_mobilis_subsp._mobilis_ZM4